KRD20432.1 protein (Mycobacterium sp. Root265)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

KRD20432.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)

Predicted Functional Partners:

KRD20422.1

0.983

KRD07040.1

0.983

KRD04989.1

0.982

KRD06852.1

0.973

KRD14255.1

0.896

KRD06856.1

0.896

KRD05324.1

0.853

ASE48_31905

0.853

KRD05932.1

0.829

hemL

0.756

Your Current Organism:

Mycobacterium sp. Root265

NCBI taxonomy Id: 1736504
Other names: M. sp. Root265

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASE48_31905	KRD04989.1	ASE48_31905	ASE48_20390	PKS_TE domain-containing protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ASE48_31905	KRD05324.1	ASE48_31905	ASE48_19345	PKS_TE domain-containing protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ASE48_31905	KRD05932.1	ASE48_31905	ASE48_17475	PKS_TE domain-containing protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
ASE48_31905	KRD06852.1	ASE48_31905	ASE48_12950	PKS_TE domain-containing protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ASE48_31905	KRD06856.1	ASE48_31905	ASE48_12970	PKS_TE domain-containing protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ASE48_31905	KRD07040.1	ASE48_31905	ASE48_14055	PKS_TE domain-containing protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ASE48_31905	KRD14255.1	ASE48_31905	ASE48_04350	PKS_TE domain-containing protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ASE48_31905	KRD20422.1	ASE48_31905	ASE48_01025	PKS_TE domain-containing protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ASE48_31905	KRD20432.1	ASE48_31905	ASE48_01080	PKS_TE domain-containing protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
ASE48_31905	hemL	ASE48_31905	ASE48_14865	PKS_TE domain-containing protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Glutamate-1-semialdehyde aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.896
KRD04989.1	ASE48_31905	ASE48_20390	ASE48_31905	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	PKS_TE domain-containing protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.999
KRD04989.1	KRD05324.1	ASE48_20390	ASE48_19345	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRD04989.1	KRD05932.1	ASE48_20390	ASE48_17475	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KRD04989.1	KRD06852.1	ASE48_20390	ASE48_12950	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
KRD04989.1	KRD06856.1	ASE48_20390	ASE48_12970	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
KRD04989.1	KRD07040.1	ASE48_20390	ASE48_14055	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRD04989.1	KRD14255.1	ASE48_20390	ASE48_04350	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
KRD04989.1	KRD20422.1	ASE48_20390	ASE48_01025	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KRD04989.1	KRD20432.1	ASE48_20390	ASE48_01080	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
KRD04989.1	hemL	ASE48_20390	ASE48_14865	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate-1-semialdehyde aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.724