STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRD13049.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)    
Predicted Functional Partners:
uvrB
Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]
       0.823
KRD09604.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.692
KRD06891.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.688
KRD05334.1
Dihydropteroate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.683
KRD05950.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.672
KRD15998.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.605
KRD13050.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.595
KRD05920.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.
  
     0.591
KRD04843.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.582
KRD05666.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.488
Your Current Organism:
Mycobacterium sp. Root265
NCBI taxonomy Id: 1736504
Other names: M. sp. Root265
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.