STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQU65967.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)    
Predicted Functional Partners:
KQU65969.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.824
KQU65968.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.810
KQU80424.1
CDP-6-deoxy-delta-3,4-glucoseen reductase; Catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.801
KQU65966.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.616
KQU78073.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.587
KQU80288.1
3-methylitaconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.578
KQU67737.1
Protocatechuate 3,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.576
KQU65970.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.575
KQU65973.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.561
KQU65965.1
NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.558
Your Current Organism:
Rhizobacter sp. Root29
NCBI taxonomy Id: 1736511
Other names: R. sp. Root29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.