STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQV26468.1Catechol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)    
Predicted Functional Partners:
KQV26467.1
5-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.948
KQV26469.1
Betaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
 
  0.933
KQV26466.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.927
KQV26470.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.903
KQV26471.1
Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
 
  
  0.897
KQV26786.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.832
KQV26465.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.827
KQV26474.1
Acetoacetate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.821
KQV26475.1
DNA topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.696
KQV25132.1
Flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.553
Your Current Organism:
Yonghaparkia sp. Root332
NCBI taxonomy Id: 1736516
Other names: Y. sp. Root332
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.