STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQV25109.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa)    
Predicted Functional Partners:
KQV25110.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KQV25111.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KQV25328.1
Deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.771
KQV25206.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.706
KQV25223.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.693
KQV25205.1
RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.
 
     0.566
KQV25337.1
RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.
 
     0.545
KQV25112.1
Zinc-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family.
       0.541
KQV25113.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.407
KQV25186.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.403
Your Current Organism:
Yonghaparkia sp. Root332
NCBI taxonomy Id: 1736516
Other names: Y. sp. Root332
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.