STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQV40206.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)    
Predicted Functional Partners:
KQV30522.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.600
KQV35453.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.579
KQV28630.1
Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.545
KQV51858.1
Anthranilate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.534
KQV43244.1
Molybdopterin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.488
KQV30524.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.484
KQV40261.1
Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.477
KQV42605.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.461
KQV37109.1
Fosmidomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.422
Your Current Organism:
Massilia sp. Root335
NCBI taxonomy Id: 1736517
Other names: M. sp. Root335
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.