STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQV54134.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)    
Predicted Functional Partners:
KQV61900.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.673
KQV54132.1
Type II secretion system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.547
KQV54133.1
Spermidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.526
KQV61611.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.508
KQV53672.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.471
KQV43204.1
LppC family lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.466
KQV55399.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.464
KQV51275.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.443
KQV51276.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.443
KQV51270.1
Polyhydroxyalkanoic acid system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.434
Your Current Organism:
Duganella sp. Root336D2
NCBI taxonomy Id: 1736518
Other names: D. sp. Root336D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.