STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQV59627.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)    
Predicted Functional Partners:
glcF
Glycolate oxidase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.929
KQV59884.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.750
KQV59316.1
Malate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.739
KQV52588.1
cob(I)yrinic acid a,c-diamide adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.692
KQV43134.1
Cobalt-precorrin-4 C(11)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.633
KQV52587.1
Cobyrinic acid a,c-diamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.630
KQV52593.1
Cobalamin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.624
KQV45334.1
Cobalamin biosynthesis protein CobD; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.581
KQV52600.1
Cobalamin biosynthesis protein CobD; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.581
KQV44744.1
FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.539
Your Current Organism:
Duganella sp. Root336D2
NCBI taxonomy Id: 1736518
Other names: D. sp. Root336D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.