STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQW06458.1Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)    
Predicted Functional Partners:
KQW06460.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.955
KQW06454.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.824
KQW07882.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.819
KQW06455.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.804
KQW07883.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.783
KQW07802.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.780
KQW06457.1
Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KQW06459.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KQW03732.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.624
KQW08101.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.567
Your Current Organism:
Leifsonia sp. Root4
NCBI taxonomy Id: 1736525
Other names: L. sp. Root4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.