STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX00400.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)    
Predicted Functional Partners:
KQX00399.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.749
KQX00398.1
Peptidase M14; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.743
KQX00401.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.548
KQX00397.1
ACP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.498
KQX01714.1
UDP diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
     
 0.452
KQW91447.1
Geranyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.
    
  0.450
KQW91687.1
Octaprenyl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.
    
  0.450
KQW90077.1
Peptidase M24; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.447
KQW89302.1
X-Pro dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M24B family.
    
 0.447
KQX00350.1
Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M24B family.
    
 0.447
Your Current Organism:
Massilia sp. Root418
NCBI taxonomy Id: 1736532
Other names: M. sp. Root418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.