STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX48415.1Signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (604 aa)    
Predicted Functional Partners:
KQX46784.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.854
KQX48416.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.827
KQX62966.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.826
KQX56694.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.819
KQX57305.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.803
KQX51845.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.776
KQX48989.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.770
KQX48460.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.764
KQX62976.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.757
KQX51655.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.754
Your Current Organism:
Paenibacillus sp. Root444D2
NCBI taxonomy Id: 1736538
Other names: P. sp. Root444D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.