STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX60712.1Ring-cleaving dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)    
Predicted Functional Partners:
KQX60711.1
Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.983
KQX48629.1
Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.944
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
 
 0.883
KQX60710.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.849
KQX69037.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.635
KQX60713.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.627
KQX48508.1
Acetaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.575
KQX69106.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.564
KQX48628.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.560
KQX69114.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.516
Your Current Organism:
Paenibacillus sp. Root444D2
NCBI taxonomy Id: 1736538
Other names: P. sp. Root444D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.