STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ06860.1Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)    
Predicted Functional Partners:
KQZ18535.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.969
KQZ20097.1
Geosmin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.920
KQZ20975.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.907
KQZ03823.1
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.887
KQZ20650.1
Terpene cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.879
KQZ04238.1
Inosine-5'-monophosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.827
KQZ03106.1
2-methylisoborneol synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.820
KQZ06861.1
Polyprenyl synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.812
KQZ04318.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.796
KQZ04271.1
DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.784
Your Current Organism:
Streptomyces sp. Root55
NCBI taxonomy Id: 1736554
Other names: S. sp. Root55
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.