STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRA08750.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)    
Predicted Functional Partners:
KRA11038.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.637
KRA09423.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.576
KRA10631.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.517
KRA11844.1
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.517
KRA11960.1
Ribosomal protein N-acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.517
KRA12860.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.517
KRA08580.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.517
KRA08751.1
Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.517
KRA12047.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.513
KRA10987.1
Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.416
Your Current Organism:
Leifsonia sp. Root60
NCBI taxonomy Id: 1736567
Other names: L. sp. Root60
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.