KRB01067.1 protein (Devosia sp. Root685) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

KRB01067.1

DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)

Predicted Functional Partners:

nadE

0.756

KRA97849.1

0.647

KRA98432.1

0.602

KRB01066.1

0.560

KRA97783.1

0.532

KRA99539.1

0.490

KRB01444.1

0.448

KRA98344.1

0.448

KRA99685.1

0.437

KRA98440.1

0.430

Your Current Organism:

Devosia sp. Root685

NCBI taxonomy Id: 1736587
Other names: D. sp. Root685

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRA97783.1	KRB01067.1	ASD83_11890	ASD83_05915	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.532
KRA97849.1	KRB01067.1	ASD83_12260	ASD83_05915	Epoxide hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.647
KRA98344.1	KRB01067.1	ASD83_15090	ASD83_05915	Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
KRA98432.1	KRB01067.1	ASD83_12560	ASD83_05915	Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.602
KRA98440.1	KRB01067.1	ASD83_13010	ASD83_05915	RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.430
KRA99539.1	KRB01067.1	ASD83_03205	ASD83_05915	Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
KRA99685.1	KRB01067.1	ASD83_04040	ASD83_05915	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.437
KRB01066.1	KRB01067.1	ASD83_05910	ASD83_05915	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.560
KRB01067.1	KRA97783.1	ASD83_05915	ASD83_11890	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.532
KRB01067.1	KRA97849.1	ASD83_05915	ASD83_12260	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Epoxide hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.647
KRB01067.1	KRA98344.1	ASD83_05915	ASD83_15090	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
KRB01067.1	KRA98432.1	ASD83_05915	ASD83_12560	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.602
KRB01067.1	KRA98440.1	ASD83_05915	ASD83_13010	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.	0.430
KRB01067.1	KRA99539.1	ASD83_05915	ASD83_03205	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
KRB01067.1	KRA99685.1	ASD83_05915	ASD83_04040	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.437
KRB01067.1	KRB01066.1	ASD83_05915	ASD83_05910	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.560
KRB01067.1	KRB01444.1	ASD83_05915	ASD83_08055	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
KRB01067.1	nadE	ASD83_05915	ASD83_07360	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.	0.756
KRB01444.1	KRB01067.1	ASD83_08055	ASD83_05915	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
nadE	KRB01067.1	ASD83_07360	ASD83_05915	NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.756