KRB88817.1 protein (Sphingomonas sp. Root720)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

KRB88817.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (523 aa)

Predicted Functional Partners:

KRB88818.1

0.953

KRB88819.1

0.817

ASE22_13200

0.802

KRB87505.1

0.457

KRB88820.1

0.424

Your Current Organism:

Sphingomonas sp. Root720

NCBI taxonomy Id: 1736595
Other names: S. sp. Root720

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASE22_13200	KRB87505.1	ASE22_13200	ASE22_24315	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415
ASE22_13200	KRB88817.1	ASE22_13200	ASE22_20625	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.802
KRB87505.1	ASE22_13200	ASE22_24315	ASE22_13200	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415
KRB87505.1	KRB88817.1	ASE22_24315	ASE22_20625	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.457
KRB87505.1	KRB88818.1	ASE22_24315	ASE22_20630	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.419
KRB88817.1	ASE22_13200	ASE22_20625	ASE22_13200	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.802
KRB88817.1	KRB87505.1	ASE22_20625	ASE22_24315	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.457
KRB88817.1	KRB88818.1	ASE22_20625	ASE22_20630	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
KRB88817.1	KRB88819.1	ASE22_20625	ASE22_20635	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
KRB88817.1	KRB88820.1	ASE22_20625	ASE22_20640	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.424
KRB88818.1	KRB87505.1	ASE22_20630	ASE22_24315	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.419
KRB88818.1	KRB88817.1	ASE22_20630	ASE22_20625	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
KRB88818.1	KRB88819.1	ASE22_20630	ASE22_20635	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.793
KRB88818.1	KRB88820.1	ASE22_20630	ASE22_20640	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.424
KRB88819.1	KRB88817.1	ASE22_20635	ASE22_20625	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
KRB88819.1	KRB88818.1	ASE22_20635	ASE22_20630	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.793
KRB88819.1	KRB88820.1	ASE22_20635	ASE22_20640	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415
KRB88820.1	KRB88817.1	ASE22_20640	ASE22_20625	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.424
KRB88820.1	KRB88818.1	ASE22_20640	ASE22_20630	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.424
KRB88820.1	KRB88819.1	ASE22_20640	ASE22_20635	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415