STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRD07279.12-oxoglutarate translocator; Derived by automated computational analysis using gene prediction method: Protein Homology. (477 aa)    
Predicted Functional Partners:
KRD07280.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.711
KRD07278.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.477
KRD07277.1
2-oxoglutarate translocator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.433
KRD07281.1
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.430
KRD08049.1
Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.426
Your Current Organism:
Flavobacterium sp. Root901
NCBI taxonomy Id: 1736605
Other names: F. sp. Root901
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.