STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRD70310.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (598 aa)    
Predicted Functional Partners:
KRD66621.1
Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.865
ASE45_12370
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.660
KRD70309.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.624
KRD70308.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.585
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
    
  0.566
KRD71549.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.479
KRD67418.1
Protease domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.479
KRD68990.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.453
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
  
  0.439
tdk
Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.427
Your Current Organism:
Lysobacter sp. Root96
NCBI taxonomy Id: 1736612
Other names: L. sp. Root96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.