STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRD65824.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (459 aa)    
Predicted Functional Partners:
KRD65825.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.983
KRD66807.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.982
KRD65412.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.979
KRD66711.1
Dihydrolipoamide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.934
KRD68064.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.922
KRD69597.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.917
KRD67891.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.910
KRD65841.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.889
KRD69671.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.838
KRD67528.1
Response regulator in two-component regulatory system with CreC; CreB protein is phosphorylated by sensor protein phospho-CreC; involved in catabolic regulation; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.833
Your Current Organism:
Lysobacter sp. Root96
NCBI taxonomy Id: 1736612
Other names: L. sp. Root96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.