STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001443545_00015Unannotated protein. (297 aa)    
Predicted Functional Partners:
GCA_001443545_01288
Unannotated protein.
    
 0.939
GCA_001443545_00014
Unannotated protein.
       0.782
GCA_001443545_00016
Unannotated protein.
  
    0.761
GCA_001443545_00017
Unannotated protein.
       0.663
GCA_001443545_01337
Unannotated protein.
    
 
 0.614
GCA_001443545_00013
Unannotated protein.
       0.572
GCA_001443545_01962
Unannotated protein.
   
  
 0.510
GCA_001443545_01285
Unannotated protein.
  
  
 0.506
GCA_001443545_01130
Unannotated protein.
     
 0.499
GCA_001443545_00517
Unannotated protein.
     
 0.491
Your Current Organism:
Acidimicrobiaceae bacterium RAAP2
NCBI taxonomy Id: 1736654
Other names: A. bacterium RAAP-2, Acidimicrobiaceae bacterium RAAP-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.