STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001443545_00629Unannotated protein. (419 aa)    
Predicted Functional Partners:
GCA_001443545_00630
Unannotated protein.
 0.999
GCA_001443545_00631
Unannotated protein.
 0.998
GCA_001443545_00594
Unannotated protein.
 
 
 0.994
GCA_001443545_01618
Unannotated protein.
  
 
 0.869
GCA_001443545_00592
Unannotated protein.
  
 
  0.754
GCA_001443545_01725
Unannotated protein.
    
 0.526
GCA_001443545_02141
Unannotated protein.
      
 0.502
GCA_001443545_00904
Unannotated protein.
  
 
 0.446
GCA_001443545_00632
Unannotated protein.
       0.417
Your Current Organism:
Acidimicrobiaceae bacterium RAAP2
NCBI taxonomy Id: 1736654
Other names: A. bacterium RAAP-2, Acidimicrobiaceae bacterium RAAP-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.