STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ04051.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)    
Predicted Functional Partners:
ALJ04052.1
DNA topoisomerase IV; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.755
ALJ04238.1
DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.636
ALJ04050.1
Peptidase M14; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.530
ALJ06410.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.519
ALJ04805.1
Glycine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.468
ALJ04996.1
Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.468
ALJ04806.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.461
ALJ05654.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.461
ALJ05533.1
Gliding motility lipoprotein GldH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.450
ALJ04539.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.432
Your Current Organism:
Algibacter alginicilyticus
NCBI taxonomy Id: 1736674
Other names: A. alginicilyticus, Algibacter alginicilyticus corrig. Sun et al. 2016, Algibacter alginolytica, Algibacter sp. HZ22, CGMCC 1.11025, JCM 18496, Tamlana sp. ZJU HZ22, strain HZ22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.