STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csp1_16340Unannotated protein. (240 aa)    
Predicted Functional Partners:
dacB_2
Unannotated protein.
     
 0.815
Csp1_25000
Unannotated protein.
  
  
  0.784
dacB_1
Unannotated protein; Belongs to the peptidase S11 family.
     
 0.773
fbpB_1
Unannotated protein.
  
     0.771
aftC
Unannotated protein.
  
     0.762
fbpA
Unannotated protein.
  
     0.760
fbpB_2
Unannotated protein.
  
     0.750
Csp1_23510
Unannotated protein.
  
     0.749
fbpC
Unannotated protein.
  
     0.748
embC
Unannotated protein.
  
  
  0.746
Your Current Organism:
Corynebacterium provencense
NCBI taxonomy Id: 1737425
Other names: C. provencense, CSUR P2161, Corynebacterium sp. SN15, DSM 101074, strain Marseille-P2161, strain SN15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.