STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001486585_01409Unannotated protein. (465 aa)    
Predicted Functional Partners:
GCA_001486585_01408
Unannotated protein.
     0.994
GCA_001486585_01410
Unannotated protein.
 
 0.982
GCA_001486585_03068
Unannotated protein.
  
 0.862
GCA_001486585_01411
Unannotated protein.
 
  
 0.756
GCA_001486585_04057
Unannotated protein.
 
 0.748
GCA_001486585_01576
Unannotated protein.
     
 0.560
GCA_001486585_01575
Unannotated protein.
     
 0.553
GCA_001486585_00641
Unannotated protein.
 
 
0.458
GCA_001486585_03405
Unannotated protein.
 
 
0.458
GCA_001486585_02188
Unannotated protein.
  
    0.451
Your Current Organism:
Paenibacillus senegalimassiliensis
NCBI taxonomy Id: 1737426
Other names: CCUG 69869, CSUR P2144, P. senegalimassiliensis, Paenibacillus sp. SIT18, strain SIT18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.