STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001486585_02659Unannotated protein. (295 aa)    
Predicted Functional Partners:
GCA_001486585_02190
Unannotated protein.
 
 
 0.819
GCA_001486585_01913
Unannotated protein.
 
 
 0.790
GCA_001486585_03442
Unannotated protein.
  
 
 0.746
GCA_001486585_04101
Unannotated protein.
    
  0.728
GCA_001486585_04100
Unannotated protein.
    
  0.719
GCA_001486585_03969
Unannotated protein.
 
 
  0.657
GCA_001486585_02686
Unannotated protein.
 
  
 0.655
GCA_001486585_00415
Unannotated protein.
  
 
 0.650
GCA_001486585_03384
Unannotated protein.
  
 
  0.627
GCA_001486585_04004
Unannotated protein.
  
 
  0.627
Your Current Organism:
Paenibacillus senegalimassiliensis
NCBI taxonomy Id: 1737426
Other names: CCUG 69869, CSUR P2144, P. senegalimassiliensis, Paenibacillus sp. SIT18, strain SIT18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.