STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC06564.1Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (601 aa)    
Predicted Functional Partners:
OCC06572.1
Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
OCC06652.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.989
OCC06565.1
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.963
BA190_29820
Hypothetical protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.956
OCC06562.1
16S rRNA (cytosine(1402)-N(4))-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.921
OCC06578.1
Cell division protein FtsA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.908
OCC05542.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.902
OCC01988.1
Monofunctional biosynthetic peptidoglycan transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.900
OCC00392.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
0.895
OCC06563.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.891
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.