STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC06478.1Ornithine cyclodeaminase; Catalyzes the formation of L-proline from L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)    
Predicted Functional Partners:
putA
Proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.839
OCC02371.1
Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.763
OCC04130.1
Pyrroline-5-carboxylate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.747
OCC04247.1
Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.702
OCC02142.1
Hydroxyproline-2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.650
OCC03926.1
Ornithine cyclodeaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.628
OCC00547.1
Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.628
OCC02144.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.615
OCC02035.1
Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.571
OCC01357.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.571
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.