STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC06388.1Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)    
Predicted Functional Partners:
putA
Proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.792
OCC03272.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.764
OCC06458.1
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.693
OCC02371.1
Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.692
OCC03592.1
Urease subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.685
OCC04017.1
Agmatine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.684
OCC00384.1
N-carbamoylputrescine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.669
OCC04825.1
Acetylornithine transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.636
OCC04186.1
Imidazolonepropionase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.635
OCC04198.1
Glucose-1-phosphate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.601
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.