STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC05909.1Preprotein translocase subunit SecA; Derived by automated computational analysis using gene prediction method: Protein Homology. (939 aa)    
Predicted Functional Partners:
OCC02802.1
Preprotein translocase subunit SecY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
OCC06082.1
Protein-export chaperone SecB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.997
OCC03301.1
Preprotein translocase subunit SecG; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.997
OCC01007.1
Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.996
OCC01269.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.995
OCC02798.1
50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.959
BA190_31010
Hypothetical protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.950
OCC03249.1
50S ribosomal protein L19; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.946
OCC05575.1
Protein-export membrane protein SecD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.942
OCC02784.1
50S ribosomal protein L23; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.936
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.