STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC05918.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (1074 aa)    
Predicted Functional Partners:
OCC05958.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.981
OCC07067.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.932
OCC04622.1
Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.932
OCC05889.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.929
OCC05839.1
Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.929
OCC04009.1
Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  0.929
OCC02620.1
Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.929
OCC01304.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.929
OCC02568.1
Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.927
OCC01862.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  0.924
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.