STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC05962.1Methionine biosynthesis protein MetW; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)    
Predicted Functional Partners:
OCC05948.1
Homoserine O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.996
OCC06345.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.863
OCC02198.1
Glycine dehydrogenase (aminomethyl-transferring); Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.682
OCC02537.1
Adenylyl-sulfate kinase; In Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis; Derived by automated computational analysis usi [...]
  
 
 0.658
OCC02886.1
Homoserine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.626
OCC04279.1
Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.592
OCC01410.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.561
OCC01332.1
Condensation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.561
OCC01408.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.541
OCC01206.1
2-acyl-glycerophospho-ethanolamine acyltransferase; Synthesizes thioester adducts of fatty acids enzymatically to the phosphopantetheine group of acyl carrier protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.539
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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