STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC05883.1DNA polymerase IV; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa)    
Predicted Functional Partners:
OCC05141.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.946
OCC05230.1
DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.946
OCC01487.1
Repressor LexA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.946
OCC01011.1
DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.946
OCC02515.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.848
OCC01898.1
Recombinase RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.840
OCC05625.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.836
OCC06572.1
Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.795
OCC02365.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.780
OCC01114.1
CbbX protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.780
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.