STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC05839.1Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)    
Predicted Functional Partners:
OCC05840.1
Macrolide ABC transporter permease/ATP-binding protein MacB; With MacA is involved in the export of macrolide; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OCC05838.1
Multidrug efflux RND transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.983
OCC05889.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.975
OCC05918.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.929
OCC04008.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.929
OCC02619.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.929
OCC04623.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.928
OCC01861.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.928
OCC06848.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.927
OCC01864.1
Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.851
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.