OCC05586.1 protein (Labrys sp. WJW) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

OCC05586.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (176 aa)

Predicted Functional Partners:

OCC01898.1

0.934

OCC01799.1

0.912

OCC05201.1

0.663

OCC05587.1

0.580

OCC06651.1

0.569

OCC00757.1

0.569

OCC06431.1

0.566

OCC06582.1

0.565

OCC02515.1

0.540

OCC05585.1

0.532

Your Current Organism:

Labrys sp. WJW

NCBI taxonomy Id: 1737983
Other names: L. sp. WJW

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OCC00757.1	OCC05586.1	BA190_32360	BA190_07415	Galactosyldiacylglycerol synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.569
OCC01799.1	OCC01898.1	BA190_26660	BA190_26260	DNA repair protein RadA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Recombinase RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
OCC01799.1	OCC02515.1	BA190_26660	BA190_22670	DNA repair protein RadA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.541
OCC01799.1	OCC05586.1	BA190_26660	BA190_07415	DNA repair protein RadA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
OCC01799.1	OCC06582.1	BA190_26660	BA190_02635	DNA repair protein RadA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA repair protein RecN; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.628
OCC01898.1	OCC01799.1	BA190_26260	BA190_26660	Recombinase RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA repair protein RadA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
OCC01898.1	OCC02515.1	BA190_26260	BA190_22670	Recombinase RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OCC01898.1	OCC05201.1	BA190_26260	BA190_09850	Recombinase RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Crossover junction endodeoxyribonuclease RuvC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.429
OCC01898.1	OCC05586.1	BA190_26260	BA190_07415	Recombinase RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.934
OCC01898.1	OCC06582.1	BA190_26260	BA190_02635	Recombinase RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA repair protein RecN; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.870
OCC02515.1	OCC01799.1	BA190_22670	BA190_26660	DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA repair protein RadA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.541
OCC02515.1	OCC01898.1	BA190_22670	BA190_26260	DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.	Recombinase RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OCC02515.1	OCC05201.1	BA190_22670	BA190_09850	DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.	Crossover junction endodeoxyribonuclease RuvC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.602
OCC02515.1	OCC05586.1	BA190_22670	BA190_07415	DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
OCC02515.1	OCC06431.1	BA190_22670	BA190_04195	DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.523
OCC02515.1	OCC06582.1	BA190_22670	BA190_02635	DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA repair protein RecN; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.520
OCC05201.1	OCC01898.1	BA190_09850	BA190_26260	Crossover junction endodeoxyribonuclease RuvC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Recombinase RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.429
OCC05201.1	OCC02515.1	BA190_09850	BA190_22670	Crossover junction endodeoxyribonuclease RuvC; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.602
OCC05201.1	OCC05586.1	BA190_09850	BA190_07415	Crossover junction endodeoxyribonuclease RuvC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.663
OCC05585.1	OCC05586.1	BA190_07410	BA190_07415	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.532