STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC05633.1Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)    
Predicted Functional Partners:
OCC05634.1
Transcription-repair coupling factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
OCC05635.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
OCC00897.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.534
OCC05636.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.525
OCC05387.1
Threonine synthase (modular protein); Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.479
OCC02897.1
Threonine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.463
OCC03376.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.454
OCC06293.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.441
OCC06187.1
Segregation protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.441
OCC03828.1
Cysteine desulfurase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.441
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.