STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC05418.1Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)    
Predicted Functional Partners:
gatB
aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
OCC01136.1
asparaginyl/glutamyl-tRNA amidotransferase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
OCC02712.1
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.954
OCC01163.1
3-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.916
OCC05006.1
acetyl/propionyl-CoA carboxylase subuit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.913
OCC03330.1
aspartate--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.874
OCC04617.1
Cysteine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.873
OCC01450.1
acetyl-CoA carboxylase biotin carboxylase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.843
OCC03272.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.840
OCC04972.1
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.810
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.