STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC05548.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)    
Predicted Functional Partners:
OCC05476.1
MxaD protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.992
OCC05474.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.979
OCC05475.1
VWA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.979
OCC05549.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.977
OCC05471.1
Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.965
OCC05547.1
Cytochrome c(L), periplasmic; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.960
OCC05470.1
Methanol oxidation system protein MoxJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.955
OCC05469.1
Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.947
OCC05477.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.929
OCC05473.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.928
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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