STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC05141.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (403 aa)    
Predicted Functional Partners:
OCC02515.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OCC06079.1
DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
OCC05625.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.990
OCC06217.1
DNA polymerase III subunit gamma/tau; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.989
OCC00501.1
DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.987
OCC03525.1
DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.984
OCC04354.1
ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.983
OCC04284.1
Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.980
OCC03336.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.978
OCC05145.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.975
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.