STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC04530.1Citramalate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (531 aa)    
Predicted Functional Partners:
OCC04139.1
Branched-chain amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.984
OCC03215.1
3-isopropylmalate dehydratase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.979
OCC00298.1
3-isopropylmalate dehydratase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.971
OCC06616.1
Acetolactate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.952
OCC06286.1
Dihydroxy-acid dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.927
OCC00830.1
3-isopropylmalate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.917
OCC02319.1
Dihydroxy-acid dehydratase; Catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.901
OCC02416.1
Branched-chain amino acid transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.895
OCC02854.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.890
OCC06615.1
Acetolactate synthase 3 large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.883
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.