STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC04172.1Type VI secretion system-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)    
Predicted Functional Partners:
OCC05829.1
EvpB family type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
OCC04170.1
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
OCC04171.1
EvpB family type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
OCC04169.1
Nitrogen fixation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.996
OCC04174.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
OCC05830.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
OCC04163.1
Cell envelope biogenesis protein OmpA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.986
OCC05821.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.979
OCC04164.1
Type VI secretion system-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.965
OCC05820.1
Type VI secretion system-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.952
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.