STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC03948.1Histidinol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)    
Predicted Functional Partners:
OCC02641.1
Imidazoleglycerol-phosphate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
OCC02638.1
Imidazole glycerol phosphate synthase subunit HisF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.981
OCC03740.1
phosphoribosyl-AMP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.980
OCC02678.1
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.978
OCC02639.1
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.978
OCC01356.1
ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.977
OCC07004.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.957
OCC02637.1
phosphoribosyl-ATP diphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.956
OCC00360.1
Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.933
OCC02515.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.859
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.