STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC03658.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (87 aa)    
Predicted Functional Partners:
putA
Proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.887
OCC06195.1
tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.793
OCC02797.1
50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.792
OCC01206.1
2-acyl-glycerophospho-ethanolamine acyltransferase; Synthesizes thioester adducts of fatty acids enzymatically to the phosphopantetheine group of acyl carrier protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.596
OCC03938.1
CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.552
OCC05632.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.537
OCC03773.1
Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.537
OCC01409.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.537
OCC00924.1
long-chain-fatty-acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.537
OCC02142.1
Hydroxyproline-2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.524
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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