Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OCC01569.1 | OCC02357.1 | BA190_28605 | BA190_23785 | Type II 3-dehydroquinate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.967 |
| OCC01569.1 | OCC02475.1 | BA190_28605 | BA190_23780 | Type II 3-dehydroquinate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Shikimate kinase; Catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.976 |
| OCC01569.1 | OCC02526.1 | BA190_28605 | BA190_22735 | Type II 3-dehydroquinate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.702 |
| OCC01569.1 | OCC03674.1 | BA190_28605 | BA190_18285 | Type II 3-dehydroquinate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.835 |
| OCC01569.1 | OCC03799.1 | BA190_28605 | BA190_17100 | Type II 3-dehydroquinate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-phosphoshikimate 1-carboxyvinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.702 |
| OCC01569.1 | OCC04289.1 | BA190_28605 | BA190_13815 | Type II 3-dehydroquinate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.720 |
| OCC01569.1 | OCC05669.1 | BA190_28605 | BA190_06870 | Type II 3-dehydroquinate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.527 |
| OCC01569.1 | OCC06077.1 | BA190_28605 | BA190_04980 | Type II 3-dehydroquinate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.919 |
| OCC02357.1 | OCC01569.1 | BA190_23785 | BA190_28605 | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Type II 3-dehydroquinate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.967 |
| OCC02357.1 | OCC02475.1 | BA190_23785 | BA190_23780 | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Shikimate kinase; Catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| OCC02357.1 | OCC02526.1 | BA190_23785 | BA190_22735 | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.853 |
| OCC02357.1 | OCC03674.1 | BA190_23785 | BA190_18285 | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.810 |
| OCC02357.1 | OCC03799.1 | BA190_23785 | BA190_17100 | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-phosphoshikimate 1-carboxyvinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.991 |
| OCC02357.1 | OCC04289.1 | BA190_23785 | BA190_13815 | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.592 |
| OCC02357.1 | OCC05669.1 | BA190_23785 | BA190_06870 | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.983 |
| OCC02357.1 | OCC06077.1 | BA190_23785 | BA190_04980 | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.990 |
| OCC02475.1 | OCC01569.1 | BA190_23780 | BA190_28605 | Shikimate kinase; Catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | Type II 3-dehydroquinate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.976 |
| OCC02475.1 | OCC02357.1 | BA190_23780 | BA190_23785 | Shikimate kinase; Catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| OCC02475.1 | OCC02526.1 | BA190_23780 | BA190_22735 | Shikimate kinase; Catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.986 |
| OCC02475.1 | OCC03673.1 | BA190_23780 | BA190_18280 | Shikimate kinase; Catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.510 |
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