STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC03474.123S rRNA (adenine(2503)-C(2))-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)    
Predicted Functional Partners:
OCC04415.1
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.812
OCC06469.1
Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.778
OCC04998.1
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.726
OCC06053.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.722
OCC04335.1
Methionine adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.721
OCC00950.1
Adenosylhomocysteinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.673
OCC06310.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.672
OCC00365.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.672
OCC01806.1
AMP nucleosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.666
OCC00583.1
N utilization substance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.650
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.