STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC03137.1Betaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (490 aa)    
Predicted Functional Partners:
OCC03138.1
methionyl-tRNA formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.802
OCC02229.1
methionyl-tRNA formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.802
OCC03272.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.793
OCC02571.1
acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.758
OCC00760.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.756
OCC03421.1
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.746
OCC03773.1
Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.734
OCC05861.1
Acetate kinase; Enables the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.732
putA
Proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.727
OCC05560.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.709
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.