STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC02381.1Na+/H+ antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (540 aa)    
Predicted Functional Partners:
OCC00730.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.789
OCC04535.1
Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.528
OCC05512.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.511
OCC04805.1
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.485
OCC02615.1
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.485
OCC05836.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.483
OCC01651.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.483
OCC01884.1
Divalent metal cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.442
OCC03454.1
Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.437
OCC05554.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.436
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.