STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC01449.1leucyl/phenylalanyl-tRNA--protein transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)    
Predicted Functional Partners:
OCC01763.1
ATP-dependent Clp protease adapter ClpS; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.790
OCC01450.1
acetyl-CoA carboxylase biotin carboxylase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.790
OCC01568.1
acetyl-CoA carboxylase, biotin carboxyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.790
OCC01569.1
Type II 3-dehydroquinate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.780
clpS
ATP-dependent Clp protease adaptor ClpS; Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.775
OCC01682.1
ATP-dependent Clp protease ATP-binding subunit ClpA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.470
OCC01451.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.456
OCC00574.1
Arginyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.437
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.