STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC01555.1Endopeptidase La; Derived by automated computational analysis using gene prediction method: Protein Homology. (807 aa)    
Predicted Functional Partners:
OCC02066.1
HslU--HslV peptidase ATPase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.907
OCC02524.1
Nucleotide exchange factor GrpE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.905
OCC01475.1
Outer membrane protein assembly factor BamA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.904
OCC01293.1
Molecular chaperone HtpG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.904
OCC02060.1
HslU--HslV peptidase proteolytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.888
OCC05668.1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.838
OCC04312.1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.836
OCC04311.1
Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.825
OCC01554.1
ATP-dependent protease ATP-binding subunit ClpX; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.816
OCC05186.1
Cell division protein FtsH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.801
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.