STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC00988.1Thiazole synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)    
Predicted Functional Partners:
OCC00987.1
Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OCC00989.1
Thiamine-phosphate diphosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OCC00993.1
Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
OCC00985.1
Phosphomethylpyrimidine synthase ThiC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.995
OCC00986.1
Glycine oxidase ThiO; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.990
OCC02516.1
Adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
OCC05215.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.963
OCC05657.1
Molybdopterin converting factor subunit 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.958
OCC05713.1
1-deoxy-D-xylulose-5-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.908
OCC06289.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.673
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.