STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC00818.1GDP-fucose synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)    
Predicted Functional Partners:
OCC00817.1
GDP-mannose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.986
OCC02791.1
30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.884
OCC02788.1
30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.883
OCC02796.1
30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.880
OCC02786.1
30S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.877
OCC02795.1
30S ribosomal protein S14; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.874
OCC02799.1
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.871
OCC00373.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.870
OCC02783.1
50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.869
OCC02781.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.862
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.